kMEn: analyzing noisy and bidirectional transcriptional pathway responses in single subjects

Qike Li^1-4,§, A. Grant Schissler^1-4,§, Vincent Gardeux^1-3, Joanne Berghout^1-3, Ikbel Achour^1-3, Colleen Kenost^1-3, Haiquan Li^1-3,*, Hao Helen Zhang^4,5,*, Yves A. Lussier^{1-4, 6-7,*}

1Center for Biomedical Informatics and Biostatistics, 2Bio5 Institute, 3Department of Medicine, 4Graduate Interdisciplinary Program in Statistics, 5Department of Mathematics, 6University of Arizona Cancer Center, The University of Arizona, Tucson, AZ, 85721, USA, 7 Institute for Genomics and Sys-tems Biology, The University of Chicago, IL 60637, USA

Supplementary materials:

readme.txt
example.R
kMEn.R
GO_list.RData
exampleData_kMEn.csv